Description | Installation | Tutorial | Basics | Linkage methods | Comparison with other packages | Phylogenetic trees | Rationale | Multidendrograms | Example | Multifurcating Neighbor-Joining | Versatile linkage | Reference manual | Linkage functions | Usage | Arguments | Details | Value | Equivalences with other packages | Plots | History | mdendro 2.3 | mdendro 2.2 | mdendro 2.1 | mdendro 2.0 | mdendro 1.0 | Authors | Bibliography
Package: mdendro 2.3.0
mdendro: Extended Agglomerative Hierarchical Clustering
A comprehensive collection of linkage methods for agglomerative hierarchical clustering on a matrix of proximity data (distances or similarities), returning a multifurcated dendrogram or multidendrogram. Multidendrograms can group more than two clusters when ties in proximity data occur, and therefore they do not depend on the order of the input data. Descriptive measures to analyze the resulting dendrogram are additionally provided. <doi:10.18637/jss.v114.i02>.
Authors:
mdendro_2.3.0.tar.gz
mdendro_2.3.0.zip(r-4.7-x86_64)mdendro_2.3.0.zip(r-4.7-arm64)mdendro_2.3.0.zip(r-4.6-x86_64)mdendro_2.3.0.zip(r-4.6-arm64)mdendro_2.3.0.zip(r-4.5-x86_64)
mdendro_2.3.0.tgz(r-4.6-x86_64)mdendro_2.3.0.tgz(r-4.6-arm64)mdendro_2.3.0.tgz(r-4.5-x86_64)mdendro_2.3.0.tgz(r-4.5-arm64)
mdendro_2.3.0.tar.gz(r-4.7-arm64)mdendro_2.3.0.tar.gz(r-4.7-x86_64)mdendro_2.3.0.tar.gz(r-4.6-arm64)mdendro_2.3.0.tar.gz(r-4.6-x86_64)
mdendro_2.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
mdendro/json (API)
| # Install 'mdendro' in R: |
| install.packages('mdendro', repos = c('https://albyfs.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:a82048e27b. Checks:15 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 120 | ||
| linux-devel-x86_64 | OK | 148 | ||
| source / vignettes | OK | 289 | ||
| linux-release-arm64 | OK | 121 | ||
| linux-release-x86_64 | OK | 134 | ||
| macos-release-arm64 | OK | 176 | ||
| macos-release-x86_64 | OK | 261 | ||
| macos-oldrel-arm64 | OK | 155 | ||
| macos-oldrel-x86_64 | OK | 254 | ||
| windows-devel-arm64 | OK | 359 | ||
| windows-devel-x86_64 | OK | 153 | ||
| windows-release-arm64 | OK | 367 | ||
| windows-release-x86_64 | OK | 107 | ||
| windows-oldrel-x86_64 | OK | 101 | ||
| wasm-release | OK | 137 |
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Extended Agglomerative Hierarchical Clustering | descplot descval linkage |
| MultiFurcating Neighbor-Joining | mfnj |
| Plots for Extended Agglomerative Hierarchical Clustering | plot.linkage |